Description Usage Arguments Value Author(s) Examples
View source: R/gff_from_snapgene_features.R
this is a function that takes a csv with features generated from snapgene, and converts it into a gff format when exporting features from snapgene, export all feature data (csv should have 5 columns)
1 | make_gff_from_snap(file_path, chromosome, feature_source, output)
|
file_path |
the file_path is the name of the csv which has the snapgene feature output |
chromosome |
is the chromosome the features are on. |
feature_source |
is what you want in the source column |
output |
is what you want your output gff to be called (should be .gff) |
A file formatted as a gff
Grace Avecilla ga824@nyu.edu
1 2 3 4 | ## Not run:
labtools::make_gff_from_snap("~/Projects/Data/SnapBarcodeLibrary1.csv", chromosome = "II", feature_source = "levy_bc", output = "./Bc.gff")
## End(Not run)
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