combine_corr_chr: Calculate Correlation in Local Ancestry (K = 3)
In GrindeLab/STEAMcpp_mirror:
Description
Usage
Arguments
Value
See Also
View source: R/combine_corr_chr.R
Description
Create single data frame with average correlation of local ancestry
for pairs of SNPs varying distances apart. Combines data for each chromosome
generated by get_corr_chr(). Code is currently applicable
only to admixed populations with three ancestral populations.
Usage
1
combine_corr_chr(cor.list)
Arguments
cor.list
list of data tables, one per chromosome, generated by get_corr_chr().
Value
A data table with the average correlation in local ancestry, to be used for estimating the number of generations since admixture using get_g.
See Also
get_g and get_corr_chr
GrindeLab/STEAMcpp_mirror documentation built on Dec. 31, 2020, 12:05 p.m.
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Description Usage Arguments Value See Also
View source: R/combine_corr_chr.R
Description
Create single data frame with average correlation of local ancestry for pairs of SNPs varying distances apart. Combines data for each chromosome generated by get_corr_chr(). Code is currently applicable only to admixed populations with three ancestral populations.
Usage
1 | combine_corr_chr(cor.list)
|
Arguments
cor.list |
list of data tables, one per chromosome, generated by get_corr_chr(). |
Value
A data table with the average correlation in local ancestry, to be used for estimating the number of generations since admixture using get_g.
See Also
get_g and get_corr_chr
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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