generateGapFile: generateGapFile

Description Usage Arguments Author(s)

View source: R/generateGapFile.R

Description

generating gap file

Usage

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generateGapFile(out.folder = "output", ref.folder = "Ref", read.fileName,
  sample.size = 200, gap.file = "gaps.txt")

Arguments

out.folder

output folder of autoReport, that contains consensus sequences, or summary.csv from summarize output

ref.folder

reference folder

read.fileName

list of file names of read file

sample.size

sample size

gap.file

output gap file name

Author(s)

ygc


GuangchuangYu/skleid documentation built on Jan. 9, 2018, 7:59 a.m.