fasta.sample: Select a random sample of sequences
In GuillemSalazar/FastaUtils:
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/FastaUtils_functions.R
Description
This function select a random sample of sequences with or without replacement.
Usage
1
fasta.sample(infile = NULL, nseq = NULL, file.out = NULL, replacement = FALSE)
Arguments
infile
Multi-Fasta file
nseq
Sample size.
file.out
Path to output file.
replacement
Logical for using or not (default) sampling with replacement.
Value
Writes a fasta file with sampled sequences.
Author(s)
Guillem Salazar <salazar@icm.csic.es>
Examples
1
fasta.sample(infile="http://greengenes.lbl.gov/Data/JD_Tutorial/UnAligSeq24606.txt",nseq=10,file.out="out.fasta")
GuillemSalazar/FastaUtils documentation built on June 9, 2021, 7:26 p.m.
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Description Usage Arguments Value Author(s) Examples
View source: R/FastaUtils_functions.R
Description
This function select a random sample of sequences with or without replacement.
Usage
1 | fasta.sample(infile = NULL, nseq = NULL, file.out = NULL, replacement = FALSE)
|
Arguments
infile |
Multi-Fasta file |
nseq |
Sample size. |
file.out |
Path to output file. |
replacement |
Logical for using or not (default) sampling with replacement. |
Value
Writes a fasta file with sampled sequences.
Author(s)
Guillem Salazar <salazar@icm.csic.es>
Examples
1 | fasta.sample(infile="http://greengenes.lbl.gov/Data/JD_Tutorial/UnAligSeq24606.txt",nseq=10,file.out="out.fasta")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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