Man pages for HGray384/pcaNet
Probabilistic principal components analysis - covariance estimation and network reconstruction
| bpcaNet | Bayesian PCA updates |
| bpcapM | Bayesian PCA ('pcaMethods' version) |
| compute_loglikeimp | Compute the log-likelihood of the observed data given PCA... |
| compute_loglikeobs | Compute the log-likelihood of the observed data given PCA... |
| compute_rms | Compute the root mean-squared error of a PCA projection |
| initParms | Initialise model parameters for 'pca_updates' |
| orthMat | Calculate an orthonormal basis |
| pca_full | A wrapper for PCAMV (MATLAB) function implementations |
| pcaNet-package | Probabilistic principal components analysis - covariance... |
| pcapM | A wrapper for pcaMethods function implementations |
| pca_updates | PPCA updates |
| ppca2Covinv | Inverse covariance matrix computation from PPCA |
| ppca2Covplot | Covariance matrix visualisation |
| ppca2Net | Network reconstruction from PPCA |
| ppcaNet | Probabilistic PCA updates |
| ppcapM | Probabilistic PCA (pcaMethods version) |
| ppcaQ2 | Cross-validation for PCA |
| subtractMu | Subtract the row means from a matrix of data with missing... |
