Man pages for HHS/ASPR-flumodels
Deterministic compartmental models for influenza with mitigations.
| checkBetween0and1 | checkBetween0and1 |
| checkDimensionsMatch | checkDimensionsMatch |
| checkInputs.Antiviral | Check antiviral treatment inputs |
| checkInputs.SEIR | Check SEIR inputs |
| checkInputs.SEIRT | Check SEIR+T inputs |
| checkInputs.SEIRTV | Check SEIR+TV inputs |
| checkInputs.SEIRTV2Dose | Check SEIR+V 2-dose inputs |
| checkInputs.SEIRV | Check SEIR+V inputs |
| checkInputs.SEIRV2Dose | Check SEIR+V 2-dose inputs |
| checkInputs.SEIRVMono | Check SEIR+VM inputs |
| checkInputs.Vaccine | Check vaccine inputs |
| checkInputs.Vaccine2Dose | Check 2-Dose vaccine inputs |
| checkInputs.VaccineMonovalent | Check vaccine inputs |
| checkNonNegative | checkNonNegative |
| checkNonNegativeNumber | checkNonNegativeNumber |
| checkPositive | checkPositive |
| checkPositiveNumber | checkPositiveNumber |
| computeActualRTimeSeries | Compute actual reproductive number time series |
| computeVEp | computeVEp |
| computeVEs | computeVEs |
| computeVEsp | computeVEsp |
| flumodels | Deterministic compartmental models for influenza with... |
| getActualRTimeSeries | Get actual reproductive number time series |
| getCombinedTimeSeries | Get combined time series |
| getCombinedValue | Get combined values |
| getCompartments | Get compartments |
| getDayOfPeak | Get day of peak |
| getDayOfPeak.SEIRModel | Get day of peak |
| getDeaths | Get deaths |
| getDeaths.SEIRModel | Get deaths |
| getDeaths.SEIRTModel | Get deaths |
| getHospitalizations | Get hospitalizations |
| getHospitalizations.SEIRModel | Get hospitalizations |
| getHospitalizations.SEIRTModel | Get hospitalizations |
| getInfections | Get infections |
| getInfections.SEIRModel | Get infections |
| getInfections.SEIRTModel | Get infections |
| getInfections.SEIRTV2DoseModel | Get infections |
| getInfections.SEIRTVModel | Get infections |
| getInfections.SEIRV2DoseModel | Get infections |
| getInfections.SEIRVModel | Get infections |
| getInfections.SEIRVMonoModel | Get infections |
| getInfectionTimeSeries | Get infection time series |
| getInfectionTimeSeries.SEIRModel | Get infection time series |
| getInfectionTimeSeries.SEIRTModel | Get infection time series |
| getInfectionTimeSeries.SEIRTV2DoseModel | Get infection time series |
| getInfectionTimeSeries.SEIRTVModel | Get infection time series |
| getInfectionTimeSeries.SEIRV2DoseModel | Get infection time series |
| getInfectionTimeSeries.SEIRVModel | Get infection time series |
| getInfectionTimeSeries.SEIRVMonoModel | Get infection time series |
| getInfectiousnessVectorTimeSeries | Get infectiousness vector time series |
| getLabels | Get labels |
| getRTimeSeries | Get effective reproductive number time series |
| getSusceptibilityVectorTimeSeries | Get susceptibility vector time series |
| integrateModel | Integrate model |
| makeOutputFromDailyInfectionsByGroup | Get infection time series |
| plot | Plot |
| plot.SEIRModel | Plot |
| plot.SEIRTModel | Plot |
| SEIRModel | SEIR Model |
| SEIRTModel | SEIR+T Model |
| SEIRTV2DoseModel | SEIR+TV 2-dose Model |
| SEIRTVModel | SEIR+TV Model |
| SEIRV2DoseModel | SEIR+V 2-dose Model |
| SEIRVModel | SEIR+V Model |
| SEIRVMonoModel | SEIR+V+Mono Model |
