makeOutputFromDailyInfectionsByGroup: Get infection time series

In HHS/ASPR-flumodels: Deterministic compartmental models for influenza with mitigations.

Get infection time series

Description

Gets the time series of infections from the given model

Usage

makeOutputFromDailyInfectionsByGroup(model, dailyInfectionsByGroup, byGroup,
  asRate, byWeek)

Arguments

model	The model from which to get the data
dailyInfectionsByGroup	Calculated daily infection prevalence (either as incidence or prevalence)
byGroup	Whether or not to return data by population group; defaults to TRUE
asRate	Whether to return results as a rate (fraction of population) or else a number; defaults to FALSE
byWeek	If true, returns the output on a weekly, not daily basis; defaults to FALSE

Value

A matrix that contains the infections by simulation day (or week, if byWeek is selected)

Author(s)

Matt Clay [e-mail]

HHS/ASPR-flumodels documentation built on Dec. 6, 2022, 12:20 p.m.