Man pages for HaidYi/DASC
Detecting hidden batch factors through data adaptive adjustment for biological effects
| adj2vector | Transform the adjacency matrix to a vector |
| DASC | Detecting hidden batch factors through data adaptive... |
| get_father | Representing node in this subtype |
| Ini_SemiNMF | Initialization of the Semi-NMF |
| Loss_Fro | Get the error of Semi-NMF using frobenius norm |
| merge | Combine two trees into one |
| pred.consen | Predict the classification using consensus matrices |
| pred.nmf | Predict function of semi-NMF to determine which category are... |
| Semi_NMF | Main function of semi-NMF |
| sNMF | Parallel implement Semi-NMF for different ranks and times |
| Sptree | Get Spanning tree from adjacency matrix |
| stanfordData | Stanford RNA-Seq dataset |
| trans_ADJ | Outputs Adjacency matrix from the factor vector |
| trans_Laplace | Get Laplace matrix from factor vector |
| update_G | Update G in Semi-NMF |
