CombineBICandPriors: Internal function. For full exhaustive search, sum up the BIC...

In HamdaBinteAjmal/DBN4GRN: An R Package for Learning Sparse DBN Structures to Reverse Engineer Gene Regulatory Networks

Description

Internal function. For full exhaustive search, sum up the BIC score of each possible parent combination and the corresponsding Eij and ¬Eij scores for the edges.

Usage

CombineBICandPriors(bic_scores, priors)

Arguments

bic_scores	BIC scores for each target nodes for each possible parent combination
all_target_weights	the E and ¬E calculated for each possible parents combination
score	This refers to the type of score to be calculated. The default is "Score_LOPC". Other possible values are Score_LASSO and BIC.
gamma	value of the gamma constant added to the final score, to move the very small edge score values away from zero
all_parent_combinations	List of all the combination of parent nodes, with maximum number of parents limited to 3

HamdaBinteAjmal/DBN4GRN documentation built on Dec. 27, 2021, 2:08 p.m.