Description Usage Arguments Details Value Author(s) References Examples
10x droplet-based scRNA-seq PBMC data from 8 Lupus patients before and after 6h-treatment with INF-beta.
The dataset contains 35635 features across 29065 cells, and no filtering or preprocessing has been applied.
The original data is deposited in the Gene Expression Ombnibus (GEO) under accession number GSE96583.
1 | Kang18_8vs8(metadata = FALSE)
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metadata |
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https://www.ncbi.nlm.nih.gov/pubmed/29227470
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE96583
an object of class SingleCellExperiment
.
Helena L. Crowell helena.crowell@uzh.ch
Kang et al. (2019). "Multiplexed droplet single-cell RNA-sequencing using natural genetic variation", Nature Biotechnology 36, 89-94.
1 2 3 4 5 | # load metadata only
Kang18_8vs8(metadata = TRUE)
# load SingleCellExperiment
Kang18_8vs8(metadata = FALSE)
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