HenrikBengtsson/TopDom: An Efficient and Deterministic Method for Identifying Topological Domains in Genomes
The 'TopDom' method identifies topological domains in genomes from Hi-C sequence data (Shin et al., 2016 <doi:10.1093/nar/gkv1505>). The authors published an implementation of their method as an R script (two different versions; also available in this package). This package originates from those original 'TopDom' R scripts and provides help pages adopted from the original 'TopDom' PDF documentation. It also provides a small number of bug fixes to the original code.
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Package details |
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| Maintainer | |
| License | GPL |
| Version | 0.10.1-9003 |
| URL | https://github.com/HenrikBengtsson/TopDom |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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