revdep/failures.md

bonsai

Error before installation

Devel




* installing *binary* package ‘base64enc’ ...
* DONE (base64enc)
* installing *binary* package ‘brio’ ...
* DONE (brio)
* installing *binary* package ‘cli’ ...
* DONE (cli)
* installing *binary* package ‘codetools’ ...
* DONE (codetools)
* installing *binary* package ‘colorspace’ ...
* DONE (colorspace)
...
* installing *binary* package ‘future.apply’ ...
* DONE (future.apply)
* installing *binary* package ‘GPfit’ ...
* DONE (GPfit)
* installing *binary* package ‘gtable’ ...
* DONE (gtable)
* installing *binary* package ‘htmltools’ ...
* DONE (htmltools)
* installing *binary* package ‘inum’ ...
* DONE (inum)


CRAN




* installing *binary* package ‘base64enc’ ...
* DONE (base64enc)
* installing *binary* package ‘brio’ ...
* DONE (brio)
* installing *binary* package ‘cli’ ...
* DONE (cli)
* installing *binary* package ‘codetools’ ...
* DONE (codetools)
* installing *binary* package ‘colorspace’ ...
* DONE (colorspace)
...
* installing *binary* package ‘future.apply’ ...
* DONE (future.apply)
* installing *binary* package ‘GPfit’ ...
* DONE (GPfit)
* installing *binary* package ‘gtable’ ...
* DONE (gtable)
* installing *binary* package ‘htmltools’ ...
* DONE (htmltools)
* installing *binary* package ‘inum’ ...
* DONE (inum)


BPrinStratTTE

Run revdep_details(, "BPrinStratTTE") for more info

In both

Installation

Devel

* installing *source* package ‘BPrinStratTTE’ ...
** package ‘BPrinStratTTE’ successfully unpacked and MD5 sums checked
** using staged installation
Error in loadNamespace(x) : there is no package called ‘rstantools’
Calls: loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: configuration failed for package ‘BPrinStratTTE’
* removing ‘/c4/home/henrik/repositories/globals/revdep/checks/BPrinStratTTE/new/BPrinStratTTE.Rcheck/BPrinStratTTE’


CRAN

* installing *source* package ‘BPrinStratTTE’ ...
** package ‘BPrinStratTTE’ successfully unpacked and MD5 sums checked
** using staged installation
Error in loadNamespace(x) : there is no package called ‘rstantools’
Calls: loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: configuration failed for package ‘BPrinStratTTE’
* removing ‘/c4/home/henrik/repositories/globals/revdep/checks/BPrinStratTTE/old/BPrinStratTTE.Rcheck/BPrinStratTTE’


cft

Run revdep_details(, "cft") for more info

In both

Installation

Devel

* installing *source* package ‘cft’ ...
** package ‘cft’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) : 
  there is no package called ‘ncdf4’
Calls: <Anonymous> ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: lazy loading failed for package ‘cft’
* removing ‘/c4/home/henrik/repositories/globals/revdep/checks/cft/new/cft.Rcheck/cft’


CRAN

* installing *source* package ‘cft’ ...
** package ‘cft’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) : 
  there is no package called ‘ncdf4’
Calls: <Anonymous> ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: lazy loading failed for package ‘cft’
* removing ‘/c4/home/henrik/repositories/globals/revdep/checks/cft/old/cft.Rcheck/cft’


erah

Run revdep_details(, "erah") for more info

In both

Installation

Devel

* installing *source* package ‘erah’ ...
** package ‘erah’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 10.2.1 20210130 (Red Hat 10.2.1-11)’
gcc -I"/software/c4/cbi/software/_centos7/R-4.3.3-gcc10/lib64/R/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
gcc -I"/software/c4/cbi/software/_centos7/R-4.3.3-gcc10/lib64/R/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2  -c runfunc.c -o runfunc.o
gcc -shared -L/software/c4/cbi/software/_centos7/R-4.3.3-gcc10/lib64/R/lib -L/usr/local/lib64 -o erah.so registerDynamicSymbol.o runfunc.o -L/software/c4/cbi/software/_centos7/R-4.3.3-gcc10/lib64/R/lib -lR
installing to /c4/home/henrik/repositories/globals/revdep/checks/erah/new/erah.Rcheck/00LOCK-erah/00new/erah/libs
** R
...
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) : 
  there is no package called ‘ncdf4’
Calls: <Anonymous> ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: lazy loading failed for package ‘erah’
* removing ‘/c4/home/henrik/repositories/globals/revdep/checks/erah/new/erah.Rcheck/erah’


CRAN

* installing *source* package ‘erah’ ...
** package ‘erah’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (GCC) 10.2.1 20210130 (Red Hat 10.2.1-11)’
gcc -I"/software/c4/cbi/software/_centos7/R-4.3.3-gcc10/lib64/R/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
gcc -I"/software/c4/cbi/software/_centos7/R-4.3.3-gcc10/lib64/R/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2  -c runfunc.c -o runfunc.o
gcc -shared -L/software/c4/cbi/software/_centos7/R-4.3.3-gcc10/lib64/R/lib -L/usr/local/lib64 -o erah.so registerDynamicSymbol.o runfunc.o -L/software/c4/cbi/software/_centos7/R-4.3.3-gcc10/lib64/R/lib -lR
installing to /c4/home/henrik/repositories/globals/revdep/checks/erah/old/erah.Rcheck/00LOCK-erah/00new/erah/libs
** R
...
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) : 
  there is no package called ‘ncdf4’
Calls: <Anonymous> ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: lazy loading failed for package ‘erah’
* removing ‘/c4/home/henrik/repositories/globals/revdep/checks/erah/old/erah.Rcheck/erah’


Prostar

Run revdep_details(, "Prostar") for more info

In both

Installation

Devel

* installing *source* package ‘Prostar’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) : 
  there is no package called ‘ncdf4’
Calls: <Anonymous> ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: lazy loading failed for package ‘Prostar’
* removing ‘/c4/home/henrik/repositories/globals/revdep/checks/Prostar/new/Prostar.Rcheck/Prostar’


CRAN

* installing *source* package ‘Prostar’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) : 
  there is no package called ‘ncdf4’
Calls: <Anonymous> ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: lazy loading failed for package ‘Prostar’
* removing ‘/c4/home/henrik/repositories/globals/revdep/checks/Prostar/old/Prostar.Rcheck/Prostar’


sccomp

Error before installation

Devel




* installing *binary* package ‘abind’ ...
* DONE (abind)
* installing *binary* package ‘backports’ ...
* DONE (backports)
* installing *binary* package ‘base64enc’ ...
* DONE (base64enc)
* installing *binary* package ‘BH’ ...
* DONE (BH)
* installing *binary* package ‘BiocGenerics’ ...
* DONE (BiocGenerics)
...
* installing *binary* package ‘mime’ ...
* DONE (mime)
* installing *binary* package ‘numDeriv’ ...
* DONE (numDeriv)
* installing *binary* package ‘parallelly’ ...
* DONE (parallelly)
* installing *binary* package ‘pbapply’ ...
* DONE (pbapply)
* installing *binary* package ‘pkgconfig’ ...
* DONE (pkgconfig)


CRAN




* installing *binary* package ‘abind’ ...
* DONE (abind)
* installing *binary* package ‘backports’ ...
* DONE (backports)
* installing *binary* package ‘base64enc’ ...
* DONE (base64enc)
* installing *binary* package ‘BH’ ...
* DONE (BH)
* installing *binary* package ‘BiocGenerics’ ...
* DONE (BiocGenerics)
...
* installing *binary* package ‘mime’ ...
* DONE (mime)
* installing *binary* package ‘numDeriv’ ...
* DONE (numDeriv)
* installing *binary* package ‘parallelly’ ...
* DONE (parallelly)
* installing *binary* package ‘pbapply’ ...
* DONE (pbapply)
* installing *binary* package ‘pkgconfig’ ...
* DONE (pkgconfig)


startR

Run revdep_details(, "startR") for more info

In both

Installation

Devel

* installing *source* package ‘startR’ ...
** package ‘startR’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) : 
  there is no package called ‘ncdf4’
Calls: <Anonymous> ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: lazy loading failed for package ‘startR’
* removing ‘/c4/home/henrik/repositories/globals/revdep/checks/startR/new/startR.Rcheck/startR’


CRAN

* installing *source* package ‘startR’ ...
** package ‘startR’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) : 
  there is no package called ‘ncdf4’
Calls: <Anonymous> ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: lazy loading failed for package ‘startR’
* removing ‘/c4/home/henrik/repositories/globals/revdep/checks/startR/old/startR.Rcheck/startR’


TriDimRegression

Run revdep_details(, "TriDimRegression") for more info

In both

Installation

Devel

* installing *source* package ‘TriDimRegression’ ...
** package ‘TriDimRegression’ successfully unpacked and MD5 sums checked
** using staged installation
Error in loadNamespace(x) : there is no package called ‘rstantools’
Calls: loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: configuration failed for package ‘TriDimRegression’
* removing ‘/c4/home/henrik/repositories/globals/revdep/checks/TriDimRegression/new/TriDimRegression.Rcheck/TriDimRegression’


CRAN

* installing *source* package ‘TriDimRegression’ ...
** package ‘TriDimRegression’ successfully unpacked and MD5 sums checked
** using staged installation
Error in loadNamespace(x) : there is no package called ‘rstantools’
Calls: loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: configuration failed for package ‘TriDimRegression’
* removing ‘/c4/home/henrik/repositories/globals/revdep/checks/TriDimRegression/old/TriDimRegression.Rcheck/TriDimRegression’




HenrikBengtsson/globals documentation built on March 12, 2024, 12:30 p.m.