troppca.obj: Compute Tropical PCA Objective
In HoujieWang/Rtropical: Data Analysis Tools over Space of Phylogenetic Trees Using Tropical Geometry
troppca.obj R Documentation
Compute Tropical PCA Objective
Description
Compute Tropical PCA Objective
Usage
troppca.obj(pc, x_list, cl)
troppca.obj2(pc, x_list, cl)
Arguments
pc
a matrix of principal components
x_list
a list of vectors
cl
cluster for parallel computing
Value
The numeric value of the objective function of tropical principle component analysis.
This is the sum of all tropical distance from each point to its projection on the tropical polytope.
HoujieWang/Rtropical documentation built on May 18, 2022, 11:56 a.m.
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| troppca.obj | R Documentation |
Compute Tropical PCA Objective
Description
Compute Tropical PCA Objective
Usage
troppca.obj(pc, x_list, cl) troppca.obj2(pc, x_list, cl)
Arguments
pc |
a matrix of principal components |
x_list |
a list of vectors |
cl |
cluster for parallel computing |
Value
The numeric value of the objective function of tropical principle component analysis. This is the sum of all tropical distance from each point to its projection on the tropical polytope.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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