make_cluster: Hierarchical Clustering

In Hy4m/hyplot:

Description

Reorder matrix_data by hierarchical cluster

Usage

make_cluster(
  md,
  index = 1,
  cluster = "none",
  cluster_method = "complete",
  row_dist = NULL,
  col_dist = NULL,
  ...
)

Arguments

md	a matrix_data object.
index	a integer or character index, specifying which matrix to cluster by.
cluster	one of "all", "row", "col" or "none".
cluster_method	the clustering agglomeration method to be used.
row_dist, col_dist	dist function, see details.
...	extra parameters for dist.

Value

a modified matrix_data object.

Author(s)

Hou Yun

Hy4m/hyplot documentation built on March 29, 2021, 6:19 p.m.