Files in ICON-in-R/NMA
Easy Network Meta-Analysis
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
CODE_OF_CONDUCT.md
DESCRIPTION
LICENSE.md
NAMESPACE
NEWS.md
NMA.Rproj
NMA.png
R/NMA.R
R/NMA_run.R
R/NMA_update.R
R/bugs_stats.R
R/check_study_data.R
R/create_bugs_code.R
R/custom_fns.R
R/data.R
R/diagnostic_plots.R
R/get_param_names.R
R/load_input_data.R
R/make_bugs_filename.R
R/make_labels.R
R/make_report.R
R/misc.R
R/my_bugs_summary.R
R/new_NMA.R
R/new_NMA_dir.R
R/new_nma_output_dir.R
R/nma_helper.R
R/nma_outputs.R
R/pairwiseTable.R
R/plot.R
R/plotNetwork.R
R/plots_and_tables.R
R/plots_and_tables_tmp.R
R/prep_bin_data.R
R/prep_codeData.R
R/prep_conts_data.R
R/prep_count_data.R
R/print.R
R/rankProbPlot.R
R/save_bugs_files.R
R/setupData.R
R/simulate_trial_data.R
R/txEffectPlot.R
R/validate_input_data.R
R/validate_nma.R
R/varPlot.R
R/write_data_to_file.R
R/write_meta.R
R/write_results_table.R
R/zzz.R
README.md
_pkgdown.yml
codecov.yml
data/binData.RData
data/contsData.RData
data/countData.RData
data/subDataBin.RData
data/subDataHR.RData
data/subDataMed.RData
docs/.nojekyll
docs/404.html
docs/CODE_OF_CONDUCT.html
docs/LICENSE.html
docs/articles/binary-data.html
docs/articles/count-data.html
docs/articles/dont-build/how-to-use-nma.html
docs/articles/dont-build/how-to-use-nma_files/figure-html/unnamed-chunk-11-1.png
docs/articles/dont-build/how-to-use-nma_files/figure-html/unnamed-chunk-11-2.png
docs/articles/dont-build/how-to-use-nma_files/figure-html/unnamed-chunk-6-1.png
docs/articles/dont-build/reference_file.html
docs/articles/dont-build/run_multiple_nma.html
docs/articles/how-to-use-nma-survival-test-data.html
docs/articles/how-to-use-nma-survival-test-data_files/figure-html/unnamed-chunk-16-1.png
docs/articles/how-to-use-nma-survival-test-data_files/figure-html/unnamed-chunk-16-2.png
docs/articles/how-to-use-nma-survival-test-data_files/figure-html/unnamed-chunk-9-1.png
docs/articles/how-to-use-nma-test-data.html
docs/articles/how-to-use-nma-test-data_files/figure-html/unnamed-chunk-12-1.png
docs/articles/how-to-use-nma-test-data_files/figure-html/unnamed-chunk-12-2.png
docs/articles/how-to-use-nma-test-data_files/figure-html/unnamed-chunk-13-1.png
docs/articles/how-to-use-nma-test-data_files/figure-html/unnamed-chunk-13-2.png
docs/articles/how-to-use-nma-test-data_files/figure-html/unnamed-chunk-16-1.png
docs/articles/how-to-use-nma-test-data_files/figure-html/unnamed-chunk-16-2.png
docs/articles/how-to-use-nma-test-data_files/figure-html/unnamed-chunk-6-1.png
docs/articles/how-to-use-nma-test-data_files/figure-html/unnamed-chunk-9-1.png
docs/articles/index.html
docs/articles/reference-file-test-data.html
docs/authors.html
docs/deps/bootstrap-5.1.0/bootstrap.bundle.min.js
docs/deps/bootstrap-5.1.0/bootstrap.bundle.min.js.map
docs/deps/bootstrap-5.1.0/bootstrap.min.css
docs/deps/data-deps.txt
docs/deps/jquery-3.6.0/jquery-3.6.0.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.map
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/NMA.html
docs/reference/NMA_run.html
docs/reference/NMA_update.html
docs/reference/Rplot001.png
docs/reference/binData.html
docs/reference/bugs_stats.html
docs/reference/contsData.html
docs/reference/countData.html
docs/reference/createFolders.html
docs/reference/create_bugs_code.html
docs/reference/diagnostic_plots.html
docs/reference/index.html
docs/reference/load_input_data.html
docs/reference/make_bugs_filename.html
docs/reference/make_report.html
docs/reference/my_bugs_summary.html
docs/reference/new_NMA.html
docs/reference/new_NMA_dir.html
docs/reference/new_nma_output_dir.html
docs/reference/nma_outputs.html
docs/reference/openPDF.html
docs/reference/pairwiseTable.html
docs/reference/plotNetwork.html
docs/reference/plots_and_tables.html
docs/reference/prep_bin_data.html
docs/reference/prep_codeData.html
docs/reference/prep_conts_data.html
docs/reference/prep_count_data.html
docs/reference/quiet.html
docs/reference/rankProbPlot.html
docs/reference/rinits.html
docs/reference/save_bugs_files.html
docs/reference/setupData.html
docs/reference/subData.html
docs/reference/subDataBin.html
docs/reference/subDataHR.html
docs/reference/subDataMed.html
docs/reference/summStat.html
docs/reference/txEffectPlot.html
docs/reference/validate_nma.html
docs/reference/varPlot.html
docs/reference/write_data_to_file.html
docs/reference/write_meta.html
docs/reference/write_results_table.html
docs/search.json
docs/sitemap.xml
inst/FE_bin.txt
inst/FE_conts.txt
inst/FE_count.txt
inst/REFERENCES.bib
inst/RE_bin.txt
inst/RE_conts.txt
inst/RE_count.txt
inst/analysis_folder/.gitignore
inst/analysis_folder/REFERENCE.csv
inst/analysis_folder/analysis.csv
inst/analysis_folder/bugs.csv
inst/analysis_folder_test/.gitignore
inst/analysis_folder_test/REFERENCE.csv
inst/analysis_folder_test/analysis.csv
inst/analysis_folder_test/bugs.csv
inst/analysis_folder_test/subData.csv
inst/extdata/.gitignore
inst/extdata/survdata_bin_test.csv
inst/extdata/survdata_med_test.csv
inst/report/biblio.bib
inst/report/report.Rmd
inst/report/report.docx
inst/report/report.pdf
inst/report/section-model.Rmd
inst/report/section-plots.Rmd
man-roxygen/args-nma.R
man/NMA_run.Rd
man/NMA_update.Rd
man/binData.Rd
man/bugs_stats.Rd
man/contsData.Rd
man/countData.Rd
man/create_bugs_code.Rd
man/diagnostic_plots.Rd
man/figures/NMA_logo.png
man/figures/hexbadge.svg
man/load_input_data.Rd
man/make_bugs_filename.Rd
man/make_report.Rd
man/my_bugs_summary.Rd
man/new_NMA.Rd
man/new_NMA_dir.Rd
man/new_nma_output_dir.Rd
man/nma.Rd
man/nma_outputs.Rd
man/openPDF.Rd
man/pairwiseTable.Rd
man/plotNetwork.Rd
man/plots_and_tables.Rd
man/prep_bin_data.Rd
man/prep_codeData.Rd
man/prep_conts_data.Rd
man/prep_count_data.Rd
man/quiet.Rd
man/rankProbPlot.Rd
man/rinits.Rd
man/save_bugs_files.Rd
man/setupData.Rd
man/subDataBin.Rd
man/subDataHR.Rd
man/subDataMed.Rd
man/summStat.Rd
man/txEffectPlot.Rd
man/validate_nma.Rd
man/varPlot.Rd
man/write_data_to_file.Rd
man/write_meta.Rd
man/write_results_table.Rd
scripts/make_hexbadge.R
scripts/non-survival data.R
scripts/run_analysis.R
scripts/run_analysis_S3.R
tests/testthat.R
tests/testthat/nma_model.RDS
tests/testthat/test-NMA_run-binary.R
tests/testthat/test-NMA_run-count.R
tests/testthat/test-NMA_run.R
vignettes/.gitignore
vignettes/binary-data.Rmd
vignettes/count-data.Rmd
vignettes/how-to-use-nma-survival-test-data.Rmd
vignettes/reference-file-test-data.Rmd
vignettes/references.bib
