readSpectrum: readSpectrum

In INRA/Rnmr1D: Perform the Complete Processing of a Set of Proton Nuclear Magnetic Resonance Spectra

readSpectrum

Description

read_spectrum belongs to the low-level functions group - it processes only one raw spectrum at time.

Usage

readSpectrum(
  ACQDIR,
  procParams,
  ppmnoise = c(10.2, 10.5),
  PHC = NULL,
  scaleIntensity = 1,
  verbose = 1
)

Arguments

ACQDIR	Full directory path of the raw spectrum, i.e the directory containing the FID
procParams	a Spec1rProcpar list
ppmnoise	the ppm range containing only noise signal in order to estimate the level of the noise (S/N ratio)
PHC	the phasing values applied to the spectrum in the frequency domain thus avoiding the automatic phasing step. Only useful if the input signal is an FID (procParams$INPUT_SIGNAL)
scaleIntensity	factor applied to the intensities to establish a change of scale.
verbose	level of debug information

Value

spec object

INRA/Rnmr1D documentation built on April 13, 2025, 10:54 p.m.