Files in IOstrovnaya/Clonality

Clonality testing

R/CM.pvalue.R R/ECMtesting.R R/GL.R R/LOHclonality.R R/LRpv.R R/LRtesting3or4tumors.R R/LRts.R R/SNVtest.R R/SNVtest2.R R/ave.adj.probes.R R/calc.freq.R R/calculateLR.R R/chromosomePlots.R R/class.all.R R/clonEM.r R/clonality.analysis.R R/complexts.R R/create.mutation.matrix.R R/freqdata.r R/func.R R/genomewidePlots.R R/get.mutation.frequencies.r R/get.oneseg.bdry.R R/grantLR.R R/grid.lik.r R/histogramPlot.R R/indiv.test.R R/lcis.r R/model.lik.r R/mutation.proba.r R/mutation.rem.r R/oneseg.R R/prettyplot.R R/print.mutation.proba.r R/print.mutation.rem.r R/refvector.R R/segment1.R R/splitChromosomes.R R/tumors.R R/xidens.r inst/doc/Clonality.pdf man/Clonality-internal.Rd man/Clonality-package.Rd man/ECMtesting.Rd man/LOHclonality.Rd man/LRtesting3or4tumors.Rd man/SNVtest.Rd man/SNVtest2.Rd man/ave.adj.probes.Rd man/chromosomePlots.Rd man/clonEM.Rd man/clonality.analysis.Rd man/create.mutation.matrix.Rd man/freqdata.Rd man/genomewidePlots.Rd man/get.mutation.frequencies.Rd man/grid.lik.Rd man/histogramPlot.Rd man/lcis.Rd man/model.lik.Rd man/mutation.proba.Rd man/mutation.rem.Rd man/print.mutation.proba.Rd man/print.mutation.rem.Rd man/splitChromosomes.Rd man/xidens.Rd