calcEqCg | The number of equivalent complete generations for several... |
calcNei | calculate Nei |
cnGMS | Setting the connection |
F1inbred | F1inbred Function to identify the inbreedign coefficent of... |
fancyPCA | fancyPCA function for plotting interactive PCA |
get1Gen | get1Gen Function for getting one generation of a pedigree |
getallGen | getallGen function for getting all generations of a pedigree |
getallGids | get1Gen Function for getting all gids associated with a name |
getallNames | get1Gen Function for getting all gids associated with a name |
getCOP | getCOP Function for getting a sparse relationship (COP)... |
getCOPgalaxy | Get pedigree relationship matrix |
getF1 | getF1 function to get gid of the nearest f1 cross |
getMgid | getMgid Function for getting the last gid resulting from a... |
getPrnts | getPrnts Function to get parents of an individaul |
gidMax | gidMax Function to identify the most commonly used gid |
inDatabase | inDatabase Function to check if something is in the database |
kinNe | kinNe Function for calculating Ne using a kinship matrix |
Mode | Mode Function for finding the most frequent value in a vector |
plotPCA | plotPCA function for making a two-paneled pca plot |
sampleSelect | Sample selection function for selecting representative... |
tracePedg1 | tracePedg1 function for tracing one generation of a pedigree |
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