make_pcoa_df: Make a data frame of the ordination if the ordination method...
In JCSzamosi/aftersl1p: Generate Summary Graphics and Basic Analysis of 16s Data
make_pcoa_df R Documentation
Make a data frame of the ordination if the ordination method is PCoA. Not
exported
Description
Take a phyloseq objet and generate a data frame of the distance-based
ordination of the samples for plotting when the ordination method was PCoA.
Used internally by make_ord_df()
Usage
make_pcoa_df(ord, physeq, axes)
Arguments
ord
The ordination object generated by phyloseq::ordinate().
physeq
The phyloseq object we're making things from.
axes
A numeric vector of the axes to include.
JCSzamosi/aftersl1p documentation built on July 3, 2025, 8:37 p.m.
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| make_pcoa_df | R Documentation |
Make a data frame of the ordination if the ordination method is PCoA. Not exported
Description
Take a phyloseq objet and generate a data frame of the distance-based
ordination of the samples for plotting when the ordination method was PCoA.
Used internally by make_ord_df()
Usage
make_pcoa_df(ord, physeq, axes)
Arguments
ord |
The ordination object generated by |
physeq |
The phyloseq object we're making things from. |
axes |
A numeric vector of the axes to include. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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