plot_var: Plot parameter from a netcdf file created by GOTM

In JFeldbauer/rodeoFABM: Create FABM fortran90 code from data.frames.

Plot parameter from a netcdf file created by GOTM

Description

This function plots variables for given depths and times from a netcdf file created by running GOTM-FABM

Usage

plot_var(
  file = "output.nc",
  var = "temp",
  reference = "surface",
  z_out = NULL,
  t_out = NULL,
  res = 0.25,
  add = FALSE,
  col = 1,
  main = TRUE,
  colp = mycol(100),
  auto.xaxt = TRUE,
  ...
)

Arguments

file	Path to the netcdf file
var	Name of the variable to get
reference	Either "surface" or "bottom". The reference point for the depths sepified in 'z_out'
z_out	Vector of depths from which to get the variable. If no depths are selected (NULL, the default) all depths from the lowest to the highest depth in a equal distance of 'res'
t_out	Vector of times (as POSIX) for which the variable should be fetched. If no times are selected (NULL, the default) all available times from the netcdf file are returned
res	Spatial resolution for depths, if no depths are explicitly specified by 'z_out'
add	If only one depth is selected, add to an existing plot
col	If only one depth is selected, color of the line to plot
main	Title of the plot
colp	Color palette to use for the 2D image
auto.xaxt	Automatically create x axis labels. If set to FALSE no x axis labels are plotted.
...	additional arguments to pass to image2D or plot (if only one depth is selected)

Author(s)

Johannes Feldbauer

Examples

## Not run: 
plot_var(file = "output.nc", var = "temp")

## End(Not run)

JFeldbauer/rodeoFABM documentation built on Jan. 27, 2024, 11:41 a.m.