Man pages for JMLuther/tabletools
Helpful Tools to Make html Tables
| calculate_age | Calculate age from date of birth |
| calculate_ascvd_risk_ | Calculate 10-year ASCVD Risk (2014 original formula) |
| calculate_avg_glucose | Estimate average glucose from A1C value |
| calculate_bmi | Calculate Body Mass Index (BMI) |
| calculate_bsa | Body Surface Area Calculation |
| calculate_creatclearance_cg | Calculate estimated GFR by Cockcroft-Gault |
| calculate_creatclearance_urine | Calculate 24hour creatinine clearance by 24-hour urine... |
| calculate_ecv | Estimate Extracellular Volume |
| calculate_egfr_ckdepi | Calculate estimated GFR by CKD-EPI 2021 equation |
| calculate_egfr_ckdepi_cysc | Calculate estimated GFR by 2021 CKD-EPI creatine/Cystatin C... |
| calculate_egfr_ekfc | Calculate estimated GFR, European Kidney Function Consortium... |
| calculate_egfr_fas | Estimated GFR using Full Age Spectrum formula (FAS) |
| calculate_egfr_krs | Calculate estimated GFR, Kidney transplant Recipient Specific... |
| calculate_egfr_mdrd | Calculate estimated GFR by MDRD |
| calculate_gomez | Gomez formulas for renal afferent/efferent resistance |
| calculate_h2fpef | H2PEF calculator Returns the H2FPEF |
| calculate_homair | Calculate HOMA-IR from fasting glucose and insulin |
| calculate_ibw | Ideal Body Weight Calculation |
| calculate_iga_risk_postbiopsy | International IgAN Prediction Tool post-biopsy |
| calculate_igi30 | Insulinogenic Index Calculation (from standard 75g OGTT) |
| calculate_isi_avignon | Avignon Insulin Sensitivity Index Calculation (from standard... |
| calculate_isi_belfiore | Belfiore Insulin Sensitivity Index Calculation (from standard... |
| calculate_isi_bigtt | OGTT BIGTT estimates of beta cell function and insulin... |
| calculate_isi_caumo | Caumo OGTT Insulin Sensitivity Index Calculation (from... |
| calculate_isi_cederholm | Cederholm Insulin Sensitivity Index Calculation (from... |
| calculate_isi_gutt | Gutt Insulin Sensitivity Index Calculation (from standard 75g... |
| calculate_isi_matsuda | Matsuda-Defronzo Index Calculation (from standard 75g OGTT) |
| calculate_isi_matsuda_df | Matsuda-Defronzo Index Calculation (from standard 75g OGTT) |
| calculate_isi_ogis | OGTT Insulin Sensitivity Index Calculation (OGIS; from... |
| calculate_isi_stumvoll | Stumvoll Insulin Sensitivity Index Calculation (from standard... |
| calculate_lvmass | Calculate LV Mass using Echocardiogram results |
| calculate_map | Calculate Mean Arterial Pressure |
| calculate_matsuda_index | Matsuda-Defronzo Index Calculation (from standard 75g OGTT) |
| calculate_mgfr_2c | Iohexol measured GFR with 2-compartment model (early and late... |
| calculate_mgfr_msp | Iohexol Multiple Sample Protocol (MSP) estimate of GFR |
| calculate_mgfr_relm | Relmipirazin measured GFR with 2-compartment model (early and... |
| calculate_mgfr_ss | Iohexol Single Sample (SS) measure of GFR |
| calculate_prevent_risk | Calculate AHA PREVENT Risk |
| calculate_prevent_risk_full | Calculate AHA PREVENT Risk (full model) |
| calculate_quicki | Quick Index of Insulin Sensitivity (QUICKI) |
| calculate_stumvoll_beta | Stumvoll beta cell function Calculation (from standard 75g... |
| calculate_uacr_from_ua | Calculate Urine Albumin/Creatinine ratio from Dipstick... |
| calculate_uacr_from_upcr | Calculate Urine Albumin/Creatinine ratio from... |
| clean_author_list | Reformat list of authors into Bibliography format |
| compare_mgfr_summary | Compare Iohexol mGFR results using available methods |
| convert_cholesterol_to_mM | Convert Cholesterol (Total, HDL, or LDL) from mg/dL to mmol/L |
| convert_cpeptide_to_ | Convert C-peptide concentration to uU/mL |
| convert_creatinine_to_uM | Convert Cretainine from mg/dL to umol/L |
| convert_glucose_to_mM | Convert glucose from mg/dL to mmol/L |
| convert_insulin_to_uU_ml | Convert Insulin concentration to uU/mL |
| convert_length_to_m | Convert length units |
| convert_time_to_min | Convert time to minutes |
| convert_triglycerides_to_mM | Convert Triglycerides from mg/dL to mmol/L |
| convert_weight_to_kg | Convert weight to kg |
| cpeptide_params | C-peptide parameters estimates from population data |
| extract_bp | Extract blood pressure values from text (SBP/DBP) |
| factor_glucose_fasting | Fasting Glucose Classification |
| factor_glucose_tolerance | Glucose Tolerance Test Classification |
| geom_barmean | Summary bar plot (with optional error bar, overlying points) |
| geom_lm | linear regression version of geom_smooth() |
| geom_pointline_sem | ggplot group summary stat with line, point and error bar |
| gls_pvalue | Get p-value from an rms::Gls model |
| my_summary | Custom Summarization for a variable in a dataframe |
| ogtt_wide | Oral Glucose Tolerance Datasets |
| pick_bestmatch_index | Fuzzy matching functions |
| pick_bestmatch_score | Fuzzy matching functions |
| pick_bestmatch_value | Fuzzy matching functions |
| rcorr_clean | Modify rcorr results |
| rcorr_padjust | Adjust p-value for an Hmisc::rcorr object |
| sdi_decile | Get Social Deprivation Index (SDI) by Zipcode |
| table_grouped_summary | Grouped Summary Table with optional html output |
| theme_jml | my preferred basic ggplot theme R code for my preferred... |
| txt_chisquare_report | Summary text functions for html tables |
| txt_clean_nonascii | Functions to clean character strings |
| txt_mcnemar_report | Summary text functions for html tables |
| txt_mean_range | Summary text functions for html tables |
| txt_mean_sd | Summary text functions for html tables |
| txt_mean_sem | Summary text functions for html tables |
| txt_median_iqr | Summary text functions for html tables |
| txt_pct_fr | Summary text functions for html tables |
