finalize: Finalize PSI and varPSI files

In JMoon1/v2e: Assemble Comparative AS Datasets

Description

Finalizes PSI and varPSI files, to be handled by EVE. It changes PSI values to 0-1 scale and all NA's are replaced by -1. Also, any extra columns w/ exon names are removed.

Usage

finalize(data, sp, PSI = TRUE)

Arguments

data	File created by filter_exons() to be formatted for EVE model. sp Total number of columns w/ exon names. PSI Is the file you are finalizing a PSI file? Defaults to TRUE.

Examples

finalize(data = PSI_brain, sp = 3, PSI = TRUE) -> PSI_brain
finalize(data = varPSI_brain, sp = 3, PSI = FALSE) -> varPSI_brain

JMoon1/v2e documentation built on May 10, 2019, 12:51 p.m.