| extractEffects | Internal function to extract the fixed or random effects from... |
| fixef.MCMCglmm | Extract fixed effects from an 'MCMCglmm' object |
| jointPosterior | Plot the joint posterior from an MCMC |
| paramNamesMCMCglmm | Extract the parameter names from an 'MCMCglmm' object |
| postMCMCglmm | Post Estimation for MCMCglmm |
| predict2 | Define a generic prediction function |
| print.postMCMCglmmRE | Print method for extracted random effects (as standard... |
| ranefLevels | Extract the levels of factors used for random effects in... |
| ranef.MCMCglmm | Extract random effects from an 'MCMCglmm' object |
| recycler | Calculate change in predicted probabilities |
| stdranef | Extract standard deviation of "random" effects from an... |
| summary.MCMCglmmPredictedLP | Summary method for MCMCglmm predicted values |
| summary.MCMCglmmPredictedProbs | Summary method for MCMCglmm predicted probabilities |
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