genomicRiskSummaryPlot: Function to generate the genomic risk summary plot, as seen...

In JakeConway/ClinPlots: ClinPlots

Description

A function to generate the genomic risk summary plot, which is a series of text plots accompanied by a line plot displaying the values from one of the columns, usually post-test probability.

Usage

genomicRiskSummaryPlot(data, column)

Arguments

data	A data.frame of the variables to use in the plots. The column that is used for the line plot must have one additional value than the other columns. The names of the columns in the data.frame will be used for the names of the columns in the plot.
column	The name or index of the column to be used for the line plot.

Examples

require(ggplot2); require(grid); require(gridExtra); require(scales);

MI_df <- read.csv(system.file("extdata", "MI_genomic_risk.txt", package = "ClinPlots"), sep='\t')
genomicRiskSummaryPlot(MI_df, "pt_probability")
#running genomicRiskSummaryPlot(MI_df, 7) will produce same result

JakeConway/ClinPlots documentation built on May 7, 2019, 10:19 a.m.