fm_params: Calculate flight flight mill parameters

In JayeNewman/flightmill: Modifies Raw Insect Flight Mill Data

Description

Loads multiple files from a single directory. The files are expected to have a first cell that has the flight flight mill run information. This information is extracted from a selected file and new columns are created with the time information which is parsed to a POSIX format.The files are combined and tidied and extra information on species and for each of the eight flight mills id is required.

Usage

fm_params(
  df,
  flightmill,
  elapsed_sec,
  counter,
  sector_distance,
  lowest_speed,
  min_time_interval,
  fm_duration
)

Arguments

df	Data frame to be modified.
flightmill	Parameter to be grouped for analysis.
elapsed_sec	Vector of the elapsed seconds parameter.
counter	Vector of the count parameter.
sector_distance	The part of the circumference that the insect has traveled between each sensor break.
lowest_speed	Lowest acceptable speed for a bout to become FALSE.
min_time_interval	Shortest time interval allowable between infrared breaks. This is to omit unrealistic speeds. The usual acceptable level is 0.01
fm_duration	The length of time in seconds of the flight mill run.

Value

A data frame is returned with flight parameters calculated from elapsed seconds and count grouped by each flight mill.

JayeNewman/flightmill documentation built on Jan. 3, 2022, 12:20 a.m.