AttMOMO: Run AttMOMO base and baseline adjusted models. Read input...

In JensXII/AttMOMO: Attributable Motality Monitoring

Run AttMOMO base and baseline adjusted models. Read input data, create output directories and return csv-file with estimates. Demanded input files must be available in wdir/data

Description

Run AttMOMO base and baseline adjusted models. Read input data, create output directories and return csv-file with estimates. Demanded input files must be available in wdir/data

Usage

AttMOMO(
  country,
  wdir,
  StartWeek,
  EndWeek,
  groups,
  pooled = NULL,
  indicators,
  lags = 2,
  ptrend = 0.05,
  p26 = 0.05,
  p52 = 0.1,
  Rdata = FALSE
)

Arguments

country	Country name.
wdir	Working directory.
StartWeek	ISOweek format
EndWeek	ISOweek format
groups	list of group names
pooled	list of group names to be pooled (default = NULL) Must be part of groups.
indicators	list if indicator variables. One file for each must be available: IndicatorName_data.txt
lags	weeks of lagged effect (default = 2, max = 9)
ptrend	significance of trend to be included (default = 0.05)
p26	significance of half year-sine be included (default = 0.05)
p52	significance of year-sine be included (default = 0.10)
Rdata	Return data to R (TRUE/FALSE - default FALSE).

Value

Write a ;-separated file AttData_indicators.txt in output directory/output.

JensXII/AttMOMO documentation built on June 24, 2024, 11:05 p.m.