Description Usage Arguments Value
You provide a reference and a querry and the function compute the percentage of the reference which is covered by the querry
1 | screenBlast(reference, querry, min.pc.ident)
|
reference |
the reference sequence that you want to screen. Fasta file in one or severa sequences |
querry |
the querry sequence. Fasta file in one or severa sequences |
numeric value of the percentage of the reference sequence which is covered by the querry
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