read_h5: H5 to scRNAs-seq analysis object
In JiekaiLab/RIOH5: The scRNA-seq data IO between R and Python(R version)
Description
Usage
Arguments
Value
Description
Read h5 and converted h5 to the scRNA-seq analysis object
Usage
1
Arguments
file
The h5 file
target.object
Denotes which object to load. Defualt is "seurat". Available options are:
"seurat": converted the h5 file to "seurat object".
"singlecellexperiment": converted the h5 file to "singlecellexperiment object".
"monocle": converted the h5 file to "monocle3 object".
assay.name
'assay.name' is used to flag the data type. Defualt is "RNA". Available options are:
"RNA": this is the scRNA-seq data.
"spatial": this is the spatial data.
Value
The single cell analysis mainstream software
JiekaiLab/RIOH5 documentation built on June 5, 2021, 8:37 a.m.
R Package Documentation
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Description Usage Arguments Value
Description
Read h5 and converted h5 to the scRNA-seq analysis object
Usage
1 |
Arguments
file |
The h5 file |
target.object |
Denotes which object to load. Defualt is "seurat". Available options are:
|
assay.name |
'assay.name' is used to flag the data type. Defualt is "RNA". Available options are:
|
Value
The single cell analysis mainstream software
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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