eigen_analyse_vectors: Eigen Analysis of Allele Frequency Change Vector Matrix
In JimWhiting91/afvaper: AF-vapeR: Allele Frequency Vector Analysis of Parallel Evolutionary Responses
View source: R/eigen_analyse_vectors.R
eigen_analyse_vectors R Documentation
Eigen Analysis of Allele Frequency Change Vector Matrix
Description
Performs eigen decomposition of a single matrix of normalised allele frequency change vectors. Can be run across the output of calc_AF_vectors() by combining with lapply()
Usage
eigen_analyse_vectors(vector_input)
Arguments
vector_input
A matrix of allele frequency change vectors
Value
A list object with three elements detailing the results: "eigenvals" contains the eigenvalue distribution, "eigenvecs" contains the eigenvectors, "A_matrix" contains the projected SNP scores for each eigenvector
JimWhiting91/afvaper documentation built on Aug. 30, 2022, 10:03 a.m.
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View source: R/eigen_analyse_vectors.R
| eigen_analyse_vectors | R Documentation |
Eigen Analysis of Allele Frequency Change Vector Matrix
Description
Performs eigen decomposition of a single matrix of normalised allele frequency change vectors. Can be run across the output of calc_AF_vectors() by combining with lapply()
Usage
eigen_analyse_vectors(vector_input)
Arguments
vector_input |
A matrix of allele frequency change vectors |
Value
A list object with three elements detailing the results: "eigenvals" contains the eigenvalue distribution, "eigenvecs" contains the eigenvectors, "A_matrix" contains the projected SNP scores for each eigenvector
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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