JimboMahoney/cytofclean: Automatically Cleans Mass Cytometry (CyTOF) FCS files
Intended to save time analysing CyTOF files by automating the initial gating steps. A simple program that takes (normalised) FCS files from a CyTOF v3 (Helios) and automatically gates the data based on the Gaussian parameters and optimal bead Channel (EQ beads). The resulting files, containing only cells, will be much smaller and can thus be uploaded to Cytobank more quickly / take up less space or analysed in FlowJo / FCS Express etc.
Getting started
Browse package contents
Package details |
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| Author | JimboMahoney |
| Maintainer | JimboMahoney <JimboMahoney@Github.com> |
| License | Artistic-2.0 |
| Version | 1.0.3 |
| URL | https://github.com/JimboMahoney/cytofclean |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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