simplifyGO: Remove semantically similar GO terms. Based on code by Jamie...
In JoWatson2011/phosphoRWHN: Random Walk on Heterogeneous Network For Functional Analysis of Phosphoproteomics Data
Description
Usage
Arguments
Value
Description
Remove semantically similar GO terms.
Based on code by Jamie Soul:
https://github.com/soulj/SkeletalVis-Pipeline/blob/master/src/SYBIL%20Systems%20Biology/GOEnrichment.R
Usage
1
simplifyGO(GOID, semData)
Arguments
GOID
List of GOID's to simplify
semData
output from GOSemSim::godata
Value
vector of reduced GO terms
JoWatson2011/phosphoRWHN documentation built on Jan. 28, 2022, 4:02 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Remove semantically similar GO terms. Based on code by Jamie Soul: https://github.com/soulj/SkeletalVis-Pipeline/blob/master/src/SYBIL%20Systems%20Biology/GOEnrichment.R
Usage
1 | simplifyGO(GOID, semData)
|
Arguments
GOID |
List of GOID's to simplify |
semData |
output from GOSemSim::godata |
Value
vector of reduced GO terms
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.