cran-comments.md

In JohnNay/datafsm: Estimating Finite State Machine Models from Data

Test environments

• local build Windows 10, R 4.1.0
• local build ubuntu 20.04.2 LTS, R 4.1.0
• GitHub Actions builds:
• ubuntu-20.04: 20.04.2 LTS, R-release
• ubuntu-20.04: 20.04.2 LTS, R-devel
• macOS-latest: Catalina 10.15.7, R-release
• windows-latest: Server 2019 10.0.17763, R-release
• R-hub builder:
• ubuntu 20.04.1 LTS, R-release GCC
• ubuntu 20.04.1 LTS, R-devel GCC
• macOS 10.13.6 High Sierra, R-release CRAN's setup
• macOS 10.13.6 High Sierrs, R-release
• fedora, R-devel GCC
• fedora, R-devel clang, gfortran
• debian, R-release GCC
• debian, R-devel GCC
• debian, R-devel clang
• debian, R-patched GCC
• windows, server 2008 R2 SP1, R-release
• windows, server 2008 R2 SP1, R-oldrel
• windows, server 2008 R2 SP1, R-patched
• win-builder builds:
• R-release
• R-devel
• R-oldrelease

R CMD check results

• All builds except win-builder:

0 errors | 0 warnings | 0 notes

• Win-builder R-devel and R-oldrelease

0 errors | 0 warnings | 1 note

• Win-builder R-release

1 error | 1 warning | 1 note

Comments on win-builder results

• The note in R-release, R-devel, and R-oldrelease is a harmless note about changing maintainer (because I changed the arguments to person() in the Authors@R section of DESCRIPTION because the middle argument has been depracated). The maintainer remains the same, but the check observes a change from person(last="Gilligan", first="Jonathan", middle="M.", ...) to person(last="Gilligan", given = c("Jonathan", "M."), ...).

• The error and warning in R-release are false-positives resulting from win-builder not having the CRAN caret package available, even though caret is current on CRAN and has binaries available for Windows. I also observe that the caret package is listed as an import in DESCRIPTION but this error occurs only during testing with testthat but there were no errors about the dependency during installation. For these reasons I am confident that the error and warning reported by win-builder for R-release are false-positives.

The error reported by win-builder with R-release is: ``` * checking for unstated dependencies in 'tests' ... OK * checking tests ... running tests for arch 'i386' ... [7s] OK Running 'testthat.R' [6s] running tests for arch 'x64' ... [6s] ERROR Running 'testthat.R' [6s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(datafsm) > > test_check("datafsm") == Failed tests ================================================================ -- Error (test_mainfunc.R:7:9): evolve_model() returns correct type of object -- Error: DLL 'caret' not found: maybe not installed for this architecture? Backtrace: x 1. +-datafsm::evolve_model(cdata, cv = FALSE) test_mainfunc.R:7:8 2. -base::loadNamespace(x) 3. -base::library.dynam(lib, package, package.lib) -- Error (test_mainfunc.R:14:3): evolve_model() returns warnings and errors ---- Error: DLL 'caret' not found: maybe not installed for this architecture? Backtrace: x 1. +-testthat::expect_warning(evolve_model(cdata, cv = FALSE), "did not supply a data.frame") test_mainfunc.R:14:2 2. | -testthat:::quasi_capture(enquo(object), label, capture_warnings) 3. | +-testthat:::.capture(...) 4. | | -base::withCallingHandlers(...) 5. | -rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. +-datafsm::evolve_model(cdata, cv = FALSE) 7. -base::loadNamespace(x) 8. -base::library.dynam(lib, package, package.lib)

[ FAIL 2 | WARN 0 | SKIP 0 | PASS 3 ]
Error: Test failures
Execution halted

and the warning is: * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [10s] WARNING Error(s) in re-building vignettes: --- re-building 'datafsm_introduction.Rmd' using rmarkdown Quitting from lines 173-175 (datafsm_introduction.Rmd) Error: processing vignette 'datafsm_introduction.Rmd' failed with diagnostics: DLL 'caret' not found: maybe not installed for this architecture? --- failed re-building 'datafsm_introduction.Rmd'

--- re-building 'FRD_vignette.Rmd' using rmarkdown_notangle --- finished re-building 'FRD_vignette.Rmd' ```

Downstream dependencies

None.

Additional comments

• This submission updates the package to version 0.2.4

I fixed errors in the package tests that were caught by the new CHECK_MATRIX_DATA tests in r-devel under Debian.

I changed the calls to person() in the Authors@R section of DESCRIPTION because the parameter middle is now deprecated. This produces a harmless note in some R CMD check runs about a new maintainer.

JohnNay/datafsm documentation built on June 9, 2021, 10:32 p.m.