ciliates: Ciliates data (datatype = "incidence_raw")

In JohnsonHsieh/iNEXT: Interpolation and Extrapolation for Species Diversity

Ciliates data (datatype = "incidence_raw")

Description

A total of 51 soil samples were taken from three areas ( EtoshaPan, CentralNamibDesert, SouthernNamibDesert) of Namibia. In area EtoshaPan, there were 19 soil samples and the number of observed species was 216. In area CentralNamibDesert, there were 17 soil samples and the number of observed species was 130. In area SouthernNamibDesert, there were 15 soil samples and the number of observed species was 150. The total number of species in the three areas was 365. The data include three lists of matrices; each matrix is a species by soil-sample matrix ("1" for a detection, and "0" otherwise).

Usage

data("ciliates")

Format

A list 3 matrices:
$EtoshaPan is a matrix with 365 species (rows) and 19 soil samples (columns).
$CentralNamibDesert is a matrix with 365 species (rows) and 17 soil samples (columns).
$SouthernNamibDesert is a matrix with 365 species (rows) and 15 soil samples (columns).

References

Foissner, W., Agatha, S., & Berger, H. (2002) Soil Ciliates (Protozoa, Ciliophora) from Namibia (Southwest Africa), With Emphasis on Two Contrasting Environments, the Etosha Region and the Namib Desert. Denisia, 5, 1-1459.

Examples

data(ciliates)
## Not run: 
out <- iNEXT(ciliates, datatype = "incidence_raw")
ggiNEXT(out)

## End(Not run)

JohnsonHsieh/iNEXT documentation built on March 26, 2024, 5:19 a.m.