Description Usage Arguments Author(s) Examples
Plots a representation of dependency values as a triangular matrix rotated by
45 degrees. Internally, dependency values are computed using getDeps
on the data
object.
1 2 3 4 5 6 7 8 |
data |
the DLData object containing the data |
axis.at.bottom |
if |
add.legend |
if |
show.pvals |
if |
axis.labels |
the labels of the x-axis |
threshold |
ignored |
Jan Grau <grau@informatik.uni-halle.de>
1 2 3 4 5 6 7 8 9 10 | # create DLData object
seqs <- read.table(system.file("extdata", "cjun.txt", package = "DepLogo"),
stringsAsFactors = FALSE)
data <- DLData(sequences = seqs[, 1], weights = log1p(seqs[, 2]) )
# plot using default parameters
plotDepmatrix(data)
# plot with axis at top, without a legend (color scale), and using p-values
plotDepmatrix(data, axis.at.bottom = FALSE, add.legend = FALSE, show.pvals = TRUE)
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.