Man pages for JuanXie19/TCRlineageClust
| ClusterInput-class | Class 'ClusterInput' |
| clustLineages | clustering clonotype lineage |
| CombinedDataSet-class | Class 'CombinedDataSet' |
| getClonotypeLineages | Infer clonotype lineage structure from 'CombinedDatSet' |
| getClusteringInput | prepare the input for 'clustLineages' |
| getClusteringInput-TrajectoryDataSet-method | get clustering input |
| getCombinedDataSet | Initialize an object of class 'CombinedDataSet' |
| getCombinedDataSet-data.frame-Seurat-method | Combine scTCR-seq and scRNA-seq data |
| shinyInput | prepare the input for shiny app |
| shinyInput-ClusterInput-method | prepare Shiny input |
| TrajectoryDataSet-class | Class 'TrajectoryDataSet' |
