README.md

In Kaiyu-W/DNB: Compute the Dynamic Network Biomarkers(DNB) model

IMPORTANT!

This code is the old version and abandoned, new version please see package "DNBr" (https://github.com/Kaiyu-W/DNBr).

DNB

The code is written by R, to compute the Dynamic Network Biomarkers(DNB) model developed by ChenLab in CAS, China.

If you're interested in this subject, please - go to http://sysbio.sibcb.ac.cn/sysbio/cb/chenlab/LuonanChen.htm or - email [e-mail] to let us know.

To install this package, use the following command in R:

devtools::install_github("Kaiyu-W/DNB")

Main functions include - DNB, to compute the DNB model - maxDNB, to compute the Module of max score from existed DNB model - DNBplot, to visualize the result of DNB model. BTW, it's easy to visualize the result by yourself.

More details see the codes or ?DNB::function in R, please.

Example:

library(DNB)
DNB_obj <- DNB(...)
DNBplot(DNB_obj, show = TRUE)
maxDNB_obj <- maxDNB(DNB_obj)
DNBplot(maxDNB_obj, show = TRUE)

Kaiyu-W/DNB documentation built on Jan. 1, 2022, 5:19 p.m.