Files in KechrisLab/SmCCNet
Sparse Multiple Canonical Correlation Network Analysis Tool
.Rbuildignore
.Rhistory
.github/read
.github/workflows/pkgdown.yaml
.github/workflows/read
.gitignore
DESCRIPTION
NAMESPACE
R/AutoSmCCNet.R
R/Data.R
R/ModifiedPMA.R
R/MultiOmicsSmCCA.R
R/SmCCNet-source.R
R/utils-pipe.R
README.Rmd
README.md
SmCCNet.Rproj
_pkgdown.yml
data/ExampleData.RData
data/datalist
inst/NEWS
inst/single-omics-smccnet.jpg
man/X1.Rd
man/X2.Rd
man/Y.Rd
man/aggregateCVSingle.Rd
man/classifierEval.Rd
man/dataPreprocess.Rd
man/fastAutoSmCCNet.Rd
man/getAbar.Rd
man/getCCAout_single.Rd
man/getCanCorMulti.Rd
man/getCanWeightsMulti.Rd
man/getOmicsModules.Rd
man/getRobustWeightsMulti.Rd
man/getRobustWeightsMultiBinary.Rd
man/getRobustWeightsSingle.Rd
man/getRobustWeightsSingleBinary.Rd
man/networkPruning.Rd
man/pipe.Rd
man/scalingFactorInput.Rd
man/summarizeNetSHy.Rd
tests/testthat.R
tests/testthat/.Rhistory
tests/testthat/test-proprocessing.R
vignettes/SmCCNetWorkflow.pdf
vignettes/SmCCNet_Vignette_AutoSmCCNet.Rmd
vignettes/SmCCNet_Vignette_MultiOmics.Rmd
vignettes/SmCCNet_Vignette_SingleOmics.Rmd
vignettes/cat_size_79_net_1.Rdata
vignettes/cont_size_16_net_1.Rdata
vignettes/example_network_cont.png
vignettes/figures/AutoSmCCNet.png
vignettes/figures/MultiOmicsNet.png
vignettes/figures/SmCCNet-Binary.jpg
vignettes/figures/SmCCNet-Quant.jpg
vignettes/figures/SmCCNetCV.png
vignettes/figures/TotalPredictionError.jpeg
vignettes/figures/example_network_continuous.jpg
vignettes/figures/example_network_continuous.png
vignettes/figures/logo.jpg
vignettes/figures/logo.png
vignettes/figures/single-omics-smccnet.jpg
vignettes/figures/smccnetworkflow.jpg
vignettes/figures/smccnetworkflow.png
vignettes/results/CCPredictionError.csv
vignettes/results/multi_omics_quant_size_18_net_1.Rdata
vignettes/results/overallCVInfo.csv
