Files in KechrisLab/SmCCNet

Sparse Multiple Canonical Correlation Network Analysis Tool

.Rbuildignore

.Rhistory

.github/read

.github/workflows/pkgdown.yaml

.github/workflows/read

.gitignore

DESCRIPTION

NAMESPACE

R/AutoSmCCNet.R R/Data.R R/ModifiedPMA.R R/MultiOmicsSmCCA.R R/SmCCNet-source.R R/utils-pipe.R README.Rmd README.md

SmCCNet.Rproj

_pkgdown.yml

data/ExampleData.RData

data/datalist

inst/NEWS

inst/single-omics-smccnet.jpg

man/X1.Rd man/X2.Rd man/Y.Rd man/aggregateCVSingle.Rd man/classifierEval.Rd man/dataPreprocess.Rd man/fastAutoSmCCNet.Rd man/getAbar.Rd man/getCCAout_single.Rd man/getCanCorMulti.Rd man/getCanWeightsMulti.Rd man/getOmicsModules.Rd man/getRobustWeightsMulti.Rd man/getRobustWeightsMultiBinary.Rd man/getRobustWeightsSingle.Rd man/getRobustWeightsSingleBinary.Rd man/networkPruning.Rd man/pipe.Rd man/scalingFactorInput.Rd man/summarizeNetSHy.Rd tests/testthat.R

tests/testthat/.Rhistory

tests/testthat/test-proprocessing.R vignettes/SmCCNetWorkflow.pdf vignettes/SmCCNet_Vignette_AutoSmCCNet.Rmd vignettes/SmCCNet_Vignette_MultiOmics.Rmd vignettes/SmCCNet_Vignette_SingleOmics.Rmd

vignettes/cat_size_79_net_1.Rdata

vignettes/cont_size_16_net_1.Rdata

vignettes/example_network_cont.png

vignettes/figures/AutoSmCCNet.png

vignettes/figures/MultiOmicsNet.png

vignettes/figures/SmCCNet-Binary.jpg

vignettes/figures/SmCCNet-Quant.jpg

vignettes/figures/SmCCNetCV.png

vignettes/figures/TotalPredictionError.jpeg

vignettes/figures/example_network_continuous.jpg

vignettes/figures/example_network_continuous.png

vignettes/figures/logo.jpg

vignettes/figures/logo.png

vignettes/figures/single-omics-smccnet.jpg

vignettes/figures/smccnetworkflow.jpg

vignettes/figures/smccnetworkflow.png

vignettes/results/CCPredictionError.csv

vignettes/results/multi_omics_quant_size_18_net_1.Rdata

vignettes/results/overallCVInfo.csv

KechrisLab/SmCCNet documentation built on April 18, 2024, 9:46 p.m.