getKtsp: getKtsp
In KellyCahill/rfTSP: robust classification and feature selection for binary/multi outcomes
Description
Usage
Arguments
Value
Author(s)
Description
A function that to rank pairs of genes to return the top k pairs of genes
Usage
1
getKtsp(train, Y, k)
Arguments
train
training data, gene by sample
Y
class label for subjects, must be a numeric vector or factor
k
number of k tsps to be selected, can be arbitrary or selected via cross validation or p-value detection
Value
tsp
a matrix of gene indeces for each top scoring pair corresponding to the input train matrix
Author(s)
Kelly Cahill, Masaki Lin, Silvia Liu
KellyCahill/rfTSP documentation built on May 21, 2019, 1:41 p.m.
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Description Usage Arguments Value Author(s)
Description
A function that to rank pairs of genes to return the top k pairs of genes
Usage
1 | getKtsp(train, Y, k)
|
Arguments
train |
training data, gene by sample |
Y |
class label for subjects, must be a numeric vector or factor |
k |
number of k tsps to be selected, can be arbitrary or selected via cross validation or p-value detection |
Value
tsp |
a matrix of gene indeces for each top scoring pair corresponding to the input train matrix |
Author(s)
Kelly Cahill, Masaki Lin, Silvia Liu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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