getEvalObj: Extract peak data object
In KelseyChetnik/MetaClean: Detection of Low-Quality Peaks in Untargeted Metabolomics Data
Description
Usage
Arguments
Value
Examples
Description
This function extracts, formats, and combines the chromatographic peak data from the objects returned by the getEIC() and fillPeaks()
functions from the XCMS package.
Usage
1
getEvalObj(xs, fill)
Arguments
xs
An xcmsEIC object returned by the getEIC() function from the XCMS package
fill
An xcmsSet object with filled in peak groups
Value
An object of class evalObj
Examples
1
2
# call getEvalObj on test data
# \donttest{eicEval_test <- getEvalObj(xs = xs_test, fill = fill_test)}
KelseyChetnik/MetaClean documentation built on May 17, 2021, 5:33 a.m.
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Description Usage Arguments Value Examples
Description
This function extracts, formats, and combines the chromatographic peak data from the objects returned by the getEIC() and fillPeaks() functions from the XCMS package.
Usage
1 | getEvalObj(xs, fill)
|
Arguments
xs |
An xcmsEIC object returned by the getEIC() function from the XCMS package |
fill |
An xcmsSet object with filled in peak groups |
Value
An object of class evalObj
Examples
1 2 | # call getEvalObj on test data
# \donttest{eicEval_test <- getEvalObj(xs = xs_test, fill = fill_test)}
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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