ec_cooc: Cooccurrence analysis

In KevCaz/ecoocc: Occurrence, co-occurrence and more

Description

Cooccurrence analysis.

Usage

ec_cooc(x, ...)

## S3 method for class 'pa'
ec_cooc(x, ...)

## S3 method for class 'cooc_count'
ec_cooc(x, nsit, ...)

ec_cooc_pairwise(x, ...)

## S3 method for class 'pa'
ec_cooc_pairwise(x, ...)

## S3 method for class 'cooc_count'
ec_cooc_pairwise(x, nsit, ...)

ec_cooc_species(x, ...)

## S3 method for class 'pa'
ec_cooc_species(x, ...)

## S3 method for class 'cooc_count'
ec_cooc_species(x, nsit, ...)

ec_cooc_global(x, ...)

## S3 method for class 'pa'
ec_cooc_global(x, ...)

## S3 method for class 'cooc_count'
ec_cooc_global(x, nsit, ...)

Arguments

x	object to be converted into an object class pa.
...	ignored.
nsit	number of sites.

Functions

• ec_cooc_pairwise: Return a matrix of cooccurrence metrics for pair of species.

• ec_cooc_species: Return a matrix of cooccurrence metrics for species.

• ec_cooc_global: Return a matrix of cooccurrence metrics for species.

KevCaz/ecoocc documentation built on Aug. 7, 2021, 8:22 p.m.