This package contains functions for RNA-Seq gene expression analysis. Includes functions to calculate if gene of interest meets the minimum 50 RPKM threshold value for it to be considered expressed. Also contains a function for accurate single-cell RNA-Seq gene expression analysis and cell type identification criteria. A RNA-Seq run cost estimation function based on number of lanes, conditions, and replicates is included in addition to datasets to use to tests the functions.
Package details |
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Author | Kevin Stevenson |
Maintainer | Kevin Stevenson <kevin71@mail.usf.edu> |
License | GNU |
Version | 0.1.0 |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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