label-class: The S4 class for storing label info.

In KonradZych/SIAMCAT: Statistical Inference of Associations between Microbial Communities And host phenoTypes

Description

The S4 class for storing label info.

Slots

.Data

inherited from list class, contains a list with:

• label numeric vector, specifying to which category samples belong, usualy made of 1s and -1s

• header contains information from the header of the label file

• info list with additional informations about the dataset

• positive.lab specifies which of two numbers in label is a positive label

• negative.lab specifies which of two numbers in label is a negative label

• n.idx numeric vector - on which positions in the label there are samples with negative label

• p.idx numeric vector - on which positions in the label there are samples with positive label

• n.lab character string with a name for the negative label (e.g. 'healthy')

• p.lab character string with a name for the positive label (e.g. 'cancer')

KonradZych/SIAMCAT documentation built on May 17, 2019, 6:20 p.m.