contains_motif: Check whether sequences fit motif
In KotulskaLab/AmyloGraph: AmyloGraph: a comprehensive database of amyloid-amyloid interactions
contains_motif R Documentation
Check whether sequences fit motif
Description
Compare each sequence against a motif. Motif is patternized
before making comparisons.
Usage
contains_motif(sequences, motif)
Arguments
sequences
[list()]
Sequences to check, each element being a tibble with name and sequence
columns.
motif
[character(1)]
Motif to look for in sequences.
Value
A logical vector of the same length as sequences vector, each
element showing whether a motif was found in a sequence.
KotulskaLab/AmyloGraph documentation built on June 30, 2023, 8:48 p.m.
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| contains_motif | R Documentation |
Check whether sequences fit motif
Description
Compare each sequence against a motif. Motif is patternized before making comparisons.
Usage
contains_motif(sequences, motif)
Arguments
sequences |
[ |
motif |
[ |
Value
A logical vector of the same length as sequences vector, each
element showing whether a motif was found in a sequence.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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