LANL-Bioinformatics/MetaComp: EDGE Taxonomy Assignments Visualization
Version 1.1.2

Implements routines for metagenome sample taxonomy assignments collection, aggregation, and visualization. Accepts the EDGE-formatted output from GOTTCHA/GOTTCHA2, BWA, Kraken, MetaPhlAn, DIAMOND, and Pangia. Produces SVG and PDF heatmap-like plots comparing taxa abundances across projects.

Getting started

Package details

Maintainer
LicenseGPL-2
Version1.1.2
URL https://github.com/seninp-bioinfo/MetaComp
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("LANL-Bioinformatics/MetaComp")
LANL-Bioinformatics/MetaComp documentation built on June 21, 2018, 2:06 p.m.