Man pages for LBMC/wormAge
Real Age Prediction from Transcriptome staging On Reference
| ae | Age Estimate |
| cor.gene_expr | Compute correlation between sample and reference data |
| dot-stratified | Build a representative CV training set |
| format_ids | Format/convert the sample gene IDs |
| format_to_ref | Format the sample and reference data to match |
| ge_im | Gene expression interpolation model |
| ge_imCV | Cross validation comparison of geim models |
| get_logFC | Extract sample or reference log-fold changes from rcmp... |
| get_refTP | Get reference expression profiles matching sample age... |
| list_refs | List the references in a data-package |
| make_ref | Create a reference object |
| makeTransparent | Make a color transparent |
| mperf | Model performance |
| plot.ae | Plot an ae object |
| plot_cor | Plot an ae object |
| plot_cor.ae | (DEPRECATED) Plot an ae object |
| plot.geim | Plot a GEIM object |
| plot.geimCV | Plot geimCV results |
| plot_refs | Plot reference timelines |
| predict.geim | Predictions of a geim model |
| prepare_refdata | Prepare the reference data included in the package |
| print.ae | Print an ae object |
| print.geim | Print a geim object |
| print.geimCV | Print a geimCV object |
| print.rcmp | Print an rcmp object |
| print.ref | Print a ref object |
| ref_compare | Compare expression changes between sample groups to a... |
| summary.ae | Print an ae object summary |
