print.ae: Print an ae object

In LBMC/wormAge: Real Age Prediction from Transcriptome staging On Reference

Print an ae object

Description

Prints the age.estimates dataframe of an ae object

Usage

## S3 method for class 'ae'
print(x, digits = 3, ...)

Arguments

x	an ae object, as returned by ae.
digits	the number of digits passed on to round
...	arguments passed on to print

Examples

requireNamespace('wormRef', quietly = TRUE)

# get some samples to stage
samp <- wormRef::Cel_larval$g[,13:15]

# load interpolated reference
r_larv <- prepare_refdata(ref = 'Cel_larval', datapkg = 'wormRef' , n.inter = 200)

# perform age estimate
ae_test <- ae(samp, r_larv)

# check output
summary(ae_test)
plot(ae_test) # plot all sample estimates
plot_cor(ae_test) # plot individual correlation profiles of samples

# get results
ae_test$age.estimates

LBMC/wormAge documentation built on April 6, 2023, 3:52 a.m.