saveResults: Save the results into the output database

In LREN-CHUV/r-mip-adaptor: DBI connection manager for HBP MIP platform

Description

Environment variables:

Usage

saveResults(results, jobId, node, resultTable, outFormat, shape, fn, conn)

Arguments

results	The results to store in the database. The following types are supported: data frame, matrix, string.
jobId	ID of the job, defaults to the value of environment parameter JOB_ID
node	Node used for the execution of the script, defaults to the value of environment parameter NODE
resultTable	Name of the result table, defaults to the value of environment parameter RESULT_TABLE
outFormat	Format requested for the output, default to value of environment parameter OUT_FORMAT
shape	Hint about the shape of the data. The following shapes are supported: string, pfa_json, pfa_yaml, r_dataframe_intermediate, r_dataframe_columns, r_matrix, r_other_intermediate
fn	Hint about the function used to produce the data, defaults to the value of environment parameter FUNCTION
conn	The connection to the database, default to global variable out_conn

Details

- Execution context: JOB_ID : ID of the job NODE : Node used for the execution of the script OUT_FORMAT : Hint for the exact shape of the Json stored in the database. Current values are PARTIAL_RESULTS, PRESENTATION RESULT_TABLE: Name of the result table, defaults to 'job_result' OUT_JDBC_DRIVER : class name of the JDBC driver for output results OUT_JDBC_JAR_PATH : path to the JDBC driver jar for output results OUT_JDBC_URL : JDBC connection URL for output results OUT_JDBC_USER : User for the database connection for output results OUT_JDBC_PASSWORD : Password for the database connection for output results FUNCTION: Name of the function executed

LREN-CHUV/r-mip-adaptor documentation built on May 20, 2019, 5:45 p.m.