API for LTLA/BiocNeighbors
Nearest Neighbor Detection for Bioconductor Packages

Global functions
.BUILDINDEX_GENERATOR Source code
.FINDKNN_GENERATOR Source code
.FINDKNN_GENERATOR_NOX Source code
.FINDNEIGHBORS_GENERATOR Source code
.FINDNEIGHBORS_GENERATOR_NOX Source code
.QUERYKNN_GENERATOR Source code
.QUERYKNN_GENERATOR_NOX Source code
.QUERYNEIGHBORS_GENERATOR Source code
.QUERYNEIGHBORS_GENERATOR_NOX Source code
.coerce_matrix_build Source code
.combine_lists Source code
.combine_matrices Source code
.default_param Source code
.define_thresholds Source code
.find_annoy_args Source code
.find_exhaustive_args Source code
.find_hnsw_args Source code
.find_kmknn_args Source code
.find_vptree_args Source code
.form_range_output Source code
.order_to_index Source code
.refine_k Source code
.setup_indices Source code
.setup_precluster Source code
.setup_query Source code
.split_matrix_for_workers Source code
.subset_to_index Source code
.template_find_knn Source code
.template_query_knn Source code
.template_range_find_exact Source code
.template_range_query_exact Source code
AnnoyIndex Man page Source code
AnnoyIndex-class Man page
AnnoyIndex_path Man page Source code
AnnoyIndex_search_mult Man page Source code
AnnoyParam Man page Source code
AnnoyParam-class Man page
AnnoyParam_directory Man page Source code
AnnoyParam_ntrees Man page Source code
AnnoyParam_search_mult Man page Source code
BiocNeighborIndex Man page
BiocNeighborIndex-class Man page
BiocNeighborParam Man page
BiocNeighborParam-class Man page
BiocNeighbors Man page
BiocNeighbors-algorithms Man page
BiocNeighbors-package Man page
BiocNeighbors-raw-index Man page
BiocNeighbors-ties Man page
ExhaustiveIndex Man page Source code
ExhaustiveIndex-class Man page
ExhaustiveParam Man page Source code
ExhaustiveParam-class Man page
HnswIndex Man page Source code
HnswIndex-class Man page
HnswIndex_ef_search Man page Source code
HnswIndex_path Man page Source code
HnswParam Man page Source code
HnswParam-class Man page
HnswParam_directory Man page Source code
HnswParam_ef_construction Man page Source code
HnswParam_ef_search Man page Source code
HnswParam_nlinks Man page Source code
KmknnIndex Man page Source code
KmknnIndex-class Man page
KmknnIndex_cluster_centers Man page Source code
KmknnIndex_cluster_info Man page Source code
KmknnParam Man page Source code
KmknnParam-class Man page
KmknnParam_kmeans_args Man page Source code
VptreeIndex Man page Source code
VptreeIndex-class Man page
VptreeIndex_nodes Man page Source code
VptreeParam Man page Source code
VptreeParam-class Man page
[[,AnnoyParam-method Man page
[[,BiocNeighborIndex-method Man page
[[,BiocNeighborParam-method Man page
[[,HnswParam-method Man page
[[<-,AnnoyParam-method Man page
[[<-,BiocNeighborParam-method Man page
[[<-,HnswParam-method Man page
annoy_version Source code
bndata Man page
bndata,BiocNeighborIndex-method Man page
bndistance Man page
bndistance,BiocNeighborIndex-method Man page
bndistance,BiocNeighborParam-method Man page
bnorder Man page
bnorder,AnnoyIndex-method Man page
bnorder,ExhaustiveIndex-method Man page
bnorder,HnswIndex-method Man page
bnorder,KmknnIndex-method Man page
bnorder,VptreeIndex-method Man page
buildAnnoy Man page Source code
buildExhaustive Man page Source code
buildHnsw Man page Source code
buildIndex Man page
buildIndex,AnnoyParam-method Man page
buildIndex,HnswParam-method Man page
buildIndex,KmknnParam-method Man page
buildIndex,VptreeParam-method Man page
buildIndex,missing-method Man page
buildKmknn Man page Source code
buildVptree Man page Source code
build_annoy Source code
build_hnsw Source code
build_vptree Source code
dim,BiocNeighborIndex-method Man page
dimnames,BiocNeighborIndex-method Man page
findAnnoy Man page Source code
findExhaustive Man page Source code
findHnsw Man page Source code
findKNN Man page
findKNN,AnnoyIndex,AnnoyParam-method Man page
findKNN,AnnoyIndex,missing-method Man page
findKNN,ExhaustiveIndex,ExhaustiveParam-method Man page
findKNN,ExhaustiveIndex,missing-method Man page
findKNN,HnswIndex,HnswParam-method Man page
findKNN,HnswIndex,missing-method Man page
findKNN,KmknnIndex,KmknnParam-method Man page
findKNN,KmknnIndex,missing-method Man page
findKNN,VptreeIndex,VptreeParam-method Man page
findKNN,VptreeIndex,missing-method Man page
findKNN,missing,AnnoyParam-method Man page
findKNN,missing,ExhaustiveParam-method Man page
findKNN,missing,HnswParam-method Man page
findKNN,missing,KmknnParam-method Man page
findKNN,missing,VptreeParam-method Man page
findKNN,missing,missing-method Man page
findKNN-functions Man page
findKNN-methods Man page
findKmknn Man page Source code
findMutualNN Man page Source code
findNeighbors Man page
findNeighbors,KmknnIndex,KmknnParam-method Man page
findNeighbors,KmknnIndex,missing-method Man page
findNeighbors,VptreeIndex,VptreeParam-method Man page
findNeighbors,VptreeIndex,missing-method Man page
findNeighbors,missing,KmknnParam-method Man page
findNeighbors,missing,VptreeParam-method Man page
findNeighbors,missing,missing-method Man page
findNeighbors-functions Man page
findNeighbors-methods Man page
findVptree Man page Source code
find_annoy Source code
find_exhaustive Source code
find_hnsw Source code
find_kmknn Source code
find_mutual_nns Source code
find_vptree Source code
l2norm Source code
queryAnnoy Man page Source code
queryExhaustive Man page Source code
queryHnsw Man page Source code
queryKNN Man page
queryKNN,AnnoyIndex,AnnoyParam-method Man page
queryKNN,AnnoyIndex,missing-method Man page
queryKNN,ExhaustiveIndex,ExhaustiveParam-method Man page
queryKNN,ExhaustiveIndex,missing-method Man page
queryKNN,HnswIndex,HnswParam-method Man page
queryKNN,HnswIndex,missing-method Man page
queryKNN,KmknnIndex,KmknnParam-method Man page
queryKNN,KmknnIndex,missing-method Man page
queryKNN,VptreeIndex,VptreeParam-method Man page
queryKNN,VptreeIndex,missing-method Man page
queryKNN,missing,AnnoyParam-method Man page
queryKNN,missing,ExhaustiveParam-method Man page
queryKNN,missing,HnswParam-method Man page
queryKNN,missing,KmknnParam-method Man page
queryKNN,missing,VptreeParam-method Man page
queryKNN,missing,missing-method Man page
queryKNN-functions Man page
queryKNN-methods Man page
queryKmknn Man page Source code
queryNeighbors Man page
queryNeighbors,KmknnIndex,KmknnParam-method Man page
queryNeighbors,KmknnIndex,missing-method Man page
queryNeighbors,VptreeIndex,VptreeParam-method Man page
queryNeighbors,VptreeIndex,missing-method Man page
queryNeighbors,missing,KmknnParam-method Man page
queryNeighbors,missing,VptreeParam-method Man page
queryNeighbors,missing,missing-method Man page
queryNeighbors-functions Man page
queryNeighbors-methods Man page
queryVptree Man page Source code
query_annoy Source code
query_exhaustive Source code
query_hnsw Source code
query_kmknn Source code
query_vptree Source code
rangeFindExhaustive Man page Source code
rangeFindKmknn Man page Source code
rangeFindVptree Man page Source code
rangeQueryExhaustive Man page Source code
rangeQueryKmknn Man page Source code
rangeQueryVptree Man page Source code
range_find_exhaustive Source code
range_find_kmknn Source code
range_find_vptree Source code
range_query_exhaustive Source code
range_query_kmknn Source code
range_query_vptree Source code
show,AnnoyIndex-method Man page
show,AnnoyParam-method Man page
show,BiocNeighborIndex-method Man page
show,BiocNeighborParam-method Man page
show,HnswIndex-method Man page
show,HnswParam-method Man page
show,KmknnIndex-method Man page
show,KmknnParam-method Man page
LTLA/BiocNeighbors documentation built on Sept. 18, 2021, 8:19 p.m.