averagePseudotime | Compute the average pseudotime |
createClusterMST | Minimum spanning trees on cluster centroids |
defineMSTPaths | Define paths through the MST |
guessMSTRoots | Guess the roots of a MST |
PseudotimeOrdering | The PseudotimeOrdering class |
rowmean | Compute column means based on a grouping variable |
splitByBranches | Split a graph into branch-free paths |
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